Using Google Cloud Platform and other open-source tools such as GATK Best Practices and DeepVariant, learn how to perform end-to-end analysis of genomic data. Starting with raw files from a sequencer, progress through variant calling, importing to BigQuery, variant annotation, quality control, BigQuery analysis, and visualization with phenotypic data. All the datasets will be publicly available and all the work done will be provided for participants to explore on their own.
Google Genomics → https://bit.ly/2TXrZ3k
GCP variant transforms (GitHub) → https://bit.ly/2UhdJHD
Next ’19 Data Analytics Sessions here → https://bit.ly/Next19DataAnalytics
Next ‘19 All Sessions playlist → https://bit.ly/Next19AllSessions
Subscribe to the GCP Channel → https://bit.ly/GCloudPlatform
Speaker(s): Andrew Moschetti
Session ID: DA220
product:Genomics API,Cloud Dataflow,BigQuery; fullname:Andrew Moschetti;
Publisher: Google Cloud
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